The agricultural product supply chain has the characteristics of multiple links, multiple participating entities, and a complex external environment. When facing external shocks, digital means play a certain role. Starting from a system perspective, relevant influencing factors were extracted based on the connotation of resilience, and correlated with digital means. A dynamic correlation model of agricultural product supply chain resilience influencing factors was constructed using system dynamics. The results indicate that the resilience of the agricultural product supply chain is increasing over time. Compared to facility construction alone, the resilience optimization plan that focuses on economic policy development and organizational management construction is more effective. The improvement of the resilience of the agricultural product supply chain throughout its entire lifecycle requires comprehensive global regulation.